BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038E02SP1|AL430547
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig970 1787 0.0
>3x_Contig970
Length = 3320
Score = 1787 bits (901), Expect = 0.0
Identities = 909/911 (99%), Gaps = 1/911 (0%)
Strand = Plus / Plus
Query: 6 tcaagtacatcttgagttctaagttgaattccgatcaatgccgataccgttacacgttgt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tcaagtacatcttgagttctaagttgaattccgatcaatgccgataccgttacacgttgt 162
Query: 66 tcggtataccagacgaataacgactcaagagtggttaaaaatggtacaattaagtattcg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tcggtataccagacgaataacgactcaagagtggttaaaaatggtacaattaagtattcg 222
Query: 126 ttgtatattacatccattgcgattatagtcagatggaagttcggtccgcattgaagaacg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ttgtatattacatccattgcgattatagtcagatggaagttcggtccgcattgaagaacg 282
Query: 186 ggatcgtttctagatttcttgctacctgagaacagttcccaatctaacagcgctatgtca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ggatcgtttctagatttcttgctacctgagaacagttcccaatctaacagcgctatgtca 342
Query: 246 atctgacattccaactcagtacgtctcttaagatcatctaaagcaattgtgttggattta 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atctgacattccaactcagtacgtctcttaagatcatctaaagcaattgtgttggattta 402
Query: 306 agcagtctccgtctacactctgactggttttcttggatgttatcttttaatcgaggcaag 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 agcagtctccgtctacactctgactggttttcttggatgttatcttttaatcgaggcaag 462
Query: 366 atgtccttttgatcagtggccacatatttatcaacgtaattagagaaaacaataggaaac 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 atgtccttttgatcagtggccacatatttatcaacgtaattagagaaaacaataggaaac 522
Query: 426 attggtgatgttccagtgcccagttcaaggacatatcgtagtttatcatcttgctgacat 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 attggtgatgttccagtgcccagttcaaggacatatcgtagtttatcatcttgctgacat 582
Query: 486 tgaaaaatggatgtaatatctacctcatcctttacaccccctcttgtgaatatggtagcg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 tgaaaaatggatgtaatatctacctcatcctttacaccccctcttgtgaatatggtagcg 642
Query: 546 ttgtcattgtataataaccatttgagaataaaagtagacgtggtccaaatgacgtatcca 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ttgtcattgtataataaccatttgagaataaaagtagacgtggtccaaatgacgtatcca 702
Query: 606 gtcgtcgagttattattatcacggttggaatttaaagaggttaggttttggtgtatacta 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 gtcgtcgagttattattatcacggttggaatttaaagaggttaggttttggtgtatacta 762
Query: 666 aatgtatactcatctctttctggtgctttttttttcctggtcactaggcgatgtggccca 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 aatgtatactcatctctttctggtgctttttttttcctggtcactaggcgatgtggccca 822
Query: 726 atgtctatctctaattctgattcgtttctcgacagaataccgagatcttgagataaatcg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 atgtctatctctaattctgattcgtttctcgacagaataccgagatcttgagataaatcg 882
Query: 786 tttgcgtta-sctctaattccacatatcgttcgaaaatgtactcatataaagtctcttca 844
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 tttgcgttagcctctaattccacatatcgttcgaaaatgtactcatataaagtctcttca 942
Query: 845 tcgagcagtactaattccatgataaacagatcgtcatcttagtaagctctgcgctgaaat 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 tcgagcagtactaattccatgataaacagatcgtcatcttagtaagctctgcgctgaaat 1002
Query: 905 ggattagtgcc 915
|||||||||||
Sbjct: 1003 ggattagtgcc 1013
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6314
Number of Sequences: 1807
Number of extensions: 6314
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)